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yqcG:On One Page

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Quickview

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Standard Name

yqcG

Gene Synonym(s)

BSU25860;

Product Desc.

putative phage DNA manipulating enzyme; skin element; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme

Product Synonyms(s)
Function from GO
Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quicklinks


DNA display   Protein display   Google(B. subtilis yqcG)   SeqSearcher   
Pubmed(B. subtilis yqcG)   Textpresso - coming soon

Notes

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Gene

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Nomenclature

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Standard name

yqcG

Mnemonic
Synonyms

BSU25860;

Notes

Location(s) and DNA Sequence

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Strain Map location Genome coordinates Genome browsers Sequence links

AL009126: 2661102..2662697
gbrowse_img.php?coord=2661102..2662697&genome=subtilis&name=AL009126&trackset=0&width=300&.png

Notes

Sequence Features

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Feature type Location Description

Notes

Alleles and Phenotypes

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Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference

Notes

Accessions in Other Databases

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Database Accession Notes

SubtiList (SubtilisWiki Page)

SubtiList:BG11298


Notes

Links

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Product(s)

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Nomenclature

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Standard name

putative phage DNA manipulating enzyme; skin element

Synonyms
Product description

putative phage DNA manipulating enzyme; skin element; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme

EC number (for enzymes)


Notes

Function

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Gene Ontology

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Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

Interactions

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Partner Type Partner Notes References Evidence

Notes

Localization

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Compartment Description Evidence Source Notes

Notes

Structure and Physical Properties

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Physical Properties

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Sequence
MKVFEAKTLL TEAEKRAQEY KDLKSKMVKL KKAFKAVADL DDSEFSGKGA NNIKSFYEDQ
AGIADQWIDL IEMKISFLTS IPGFLEDANL SDAYIEETFL AHELANAYTK SKSIMSEQKK
AMKDILNDIN DILPLDLFST ETFKNELSSA EKKRKEAIEK MDEVDQNLTS EYGLSEANEQ
MIQADYQALM NATAKGKSAS PIHYNAKAYR DSEIHKMTED VKKQSTDYIS FKDQQAEQRR
IAKEQEELAN RPWYEKSWDA VCNFTGEVSG YYDYKRAADG VDPVTGEKLT AGQRVAAGAM
AAAGYIPIVG WAGKLAKGGK AVYSTSKALY RADKALDVYK TPKTFHALQN SSKGLYGLAS
ANGFSEAITG RDMFGNKVSK ERQEQSLSGA MAMLVPFGAR GINKKLNAKS SSRVSEASTN
TSKKPKVPKT YKRPTYFRKG VRDKVWENAK DSTGSVKDPL TKQVMKKDEP WDMGHKPGYE
FRKHQQSAME RNISRKQFLD EHNNPDHYQP ELPSSNRSHK GEDMTDDYFG D
Length

531

Mol. Wt

59.671 kDa

pI

8.9 (calculated)

Extinction coefficient

67,270 - 67,395 (calc based on 23 Y, 6 W, and 1 C residues)

Domains/Motifs/Modification Sites

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Type Residues Description Notes References

Structure

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Structures
Models

Structure figures

Notes

Gene Product Resources

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Resource type Source Notes/Reference

Notes

Accessions in Other Databases

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Database Accession Notes

InterPro (SubtilisWiki Page)

InterPro:IPR006829


Notes

Links

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Expression

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Overview

Intracellular Levels

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Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)

Notes

Transcription and Transcriptional Regulation

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Transcription unit(s)

Notes

Translation and Regulation of Translation

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Notes

Turnover and Regulation of Turnover

Notes

Experimental

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Mutations Affecting Expression

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Allele Name Mutation Phenotype Reference

Expression Studies

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Type Reference Notes

Expression Resources

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Resource Name Resource Type Description Source Notes

Notes

Accessions Related to yqcG Expression

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Database Accession Notes

Notes

Links

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Evolution

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Homologs in Other Organisms

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Organism Homologs (Statistics) Comments

Do-It-Yourself Web Tools

Notes

Families

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COG
GTOP
Interpro
Pfam
SCOP Domain
SMART
SuperFamily
TIGRFAMs

Notes

Links

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References

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